PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000358.1_g850.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 327aa    MW: 34854.1 Da    PI: 7.9004
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000358.1_g850.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.28.6e-393291261
                     zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                               +++alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+s
  Pav_sc0000358.1_g850.1.mk 32 NQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRS 91
                               57899****************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MQDIHSVGGA RFFAGSGGGG GDRRLRPHHH PNQQALKCPR CDSLNTKFCY YNNYNLSQPR  60
HFCKSCRRYW TKGGVLRNVP VGGGCRKTKR SKPKSSSSSS PPPPPPQPNS ATDQHKASSH  120
SSSESSSLTN TTTAAAAVAT ATEAVSAPSS TSSASNLLSN IHRQESKFFG SQSGGFEPGA  180
AAALVEQSTE MNGMFSEIGS FTSLITSSND LPFGFGNIGV TDASVSPFRV NQQAQGHHQN  240
QWAQQNQSEE LKMQEMSGGL MDQTGQVDLS VFNGRSNGGG GGGVFGSLDW QAGSGDQGLF  300
DLPNTVDQAY WSQSQWTDQD HPTLYLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.11e-55Dof family protein