PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000363.1_g290.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 534aa MW: 59379.5 Da PI: 4.6931

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000363.1_g290.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.1	9.1e-36	109	200	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 Fl+k++++++d++l+++isw + gnsfvv+d+ ef++ +Lp+ Fkh+nf+SFvRQLn+YgF+kv++++ weF+++ Pav_sc0000363.1_g290.1.mk 109 FLSKTFDLVDDPSLDSIISWGSGGNSFVVWDPLEFSRLILPRNFKHNNFSSFVRQLNTYGFRKVDTDK---------WEFANEA 183 9**************************************************************999.........*** PP XXXXXXXXXXXXXXXXX CS HSF_DNA-bind 86 Fkkgkkellekikrkks 102 Fk+gk++ll+ki+r+ks Pav_sc0000363.1_g290.1.mk 184 FKRGKRQLLKKIQRRKS 200 *************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MNPKDESYPK SPPTSAELDP ENIGFSPLRP EMSEPLLGSQ PIPSFTSPLM EFEAFCALNP 60 SESSWSSGAF EFDEKAPTAT SSFMDAGGVE HVAVPQPLEC LQDSPVPPFL SKTFDLVDDP 120 SLDSIISWGS GGNSFVVWDP LEFSRLILPR NFKHNNFSSF VRQLNTYGFR KVDTDKWEFA 180 NEAFKRGKRQ LLKKIQRRKS PQSLQVGPSA EAGRPGLEGD IETLRKERSM LMQEVGDLQQ 240 RQQGTVHHMK VVNERLQSAE QRQKQMVSFL SKLLQNPAFL ARLQQKTGQK GIDSPRMKRK 300 FVKQHQHELG KSDSCMQGQI VKYQPAWRNH SAVPDVNPVV PIEQSPDNLS QVMAGKLGLV 360 AESKPYQFAD VASDELNLSA ETAVTRGFIK TPEQEGEGAS SMGAEDPFQK GKSVLRPQQE 420 VNPEYYVSFQ EDFGKNKMFP ELFSPGIDSM IKQEDIWSLG FDVSAGMSSS SNELWSNPIN 480 YDVPEMGVTS ELLDIWDIGP LHAAGGSGID KWPADESSFD EPDGQAAQPK DDNI

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MNPKDESYPK SPPTSAELDP ENIGFSPLRP EMSEPLLGSQ PIPSFTSPLM EFEAFCALNP  60
SESSWSSGAF EFDEKAPTAT SSFMDAGGVE HVAVPQPLEC LQDSPVPPFL SKTFDLVDDP  120
SLDSIISWGS GGNSFVVWDP LEFSRLILPR NFKHNNFSSF VRQLNTYGFR KVDTDKWEFA  180
NEAFKRGKRQ LLKKIQRRKS PQSLQVGPSA EAGRPGLEGD IETLRKERSM LMQEVGDLQQ  240
RQQGTVHHMK VVNERLQSAE QRQKQMVSFL SKLLQNPAFL ARLQQKTGQK GIDSPRMKRK  300
FVKQHQHELG KSDSCMQGQI VKYQPAWRNH SAVPDVNPVV PIEQSPDNLS QVMAGKLGLV  360
AESKPYQFAD VASDELNLSA ETAVTRGFIK TPEQEGEGAS SMGAEDPFQK GKSVLRPQQE  420
VNPEYYVSFQ EDFGKNKMFP ELFSPGIDSM IKQEDIWSLG FDVSAGMSSS SNELWSNPIN  480
YDVPEMGVTS ELLDIWDIGP LHAAGGSGID KWPADESSFD EPDGQAAQPK DDNI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	192	198	LKKIQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	8e-91	HSF family protein