PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000363.1_g420.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 205aa    MW: 22986.8 Da    PI: 5.0252
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000363.1_g420.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.51.9e-144595256
                        AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                                ykGVr+  + g+Wv+e+r p     k+ r++lg+f  +++Aa+a++ a+++l+ge
  Pav_sc0000363.1_g420.1.br 45 IYKGVRQ--RCGKWVCELRQP---DqKKSRIWLGTFTCPDMAARAYDVAALALKGE 95
                               69***86..47******9998...3357*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MTDFTDDASS SSSSNRVSAQ AHLRSGEFKK RKAGRKKFNE TRHPIYKGVR QRCGKWVCEL  60
RQPDQKKSRI WLGTFTCPDM AARAYDVAAL ALKGESAALN FPHEASTLPR IASTCSVKDL  120
QSAAAEAAEG FFEVEVKASG LKEKEEEPRR EVVYLDEEEL FNMPGLIDSL AEGLILTPPA  180
MQKGFNWNDF DDDMENVVDF SLWND
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12332LRSGEFKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.11e-34ERF family protein