PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000370.1_g320.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 83aa    MW: 9765.3 Da    PI: 8.7019
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000370.1_g320.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.56.4e-203480148
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                               +ppGfrFhPtdeelv++yL+kk+++k+++l +vik+vd+yk+ePwdL+
  Pav_sc0000370.1_g320.1.mk 34 VPPGFRFHPTDEELVDYYLRKKIASKRIDL-DVIKDVDLYKIEPWDLQ 80
                               69****************************.9***************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
MALCTLRIKK KLSSSCGSRV LDNYTEKMNT FSHVPPGFRF HPTDEELVDY YLRKKIASKR  60
IDLDVIKDVD LYKIEPWDLQ GTW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.17e-32NAC family protein