PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000373.1_g610.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 341aa MW: 38704.5 Da PI: 4.8801

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000373.1_g610.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.1	1.6e-13	97	140	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++N++++ Lr l+P+ + Kl+ a+iL A+eY+++Lq Pav_sc0000373.1_g610.1.mk 97 VAERKRRKKLNERLFALRALVPNiS------KLDRASILGDAIEYVQELQ 140 68*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MDPFICSAEN GFQEMEAMQR SMMADETQQH MHMQYMEALA PDMDLQDGND KQDSIIHDEG 60 PAADGLSDCS DQIDDDEDDA KYQRRRAGKG PQAKNLVAER KRRKKLNERL FALRALVPNI 120 SKLDRASILG DAIEYVQELQ KQAKQLQDEL DDHAEDEGPK NSGITGHHNN TQSEIQSGLD 180 PGGPKTDHQH DSVSKQSQDS DVIHDHKTQQ MEPQVEVAQL DGNQFFVKVF CEHKPGGFVR 240 LMEALSSLSL EVTNANVTSF RCLVSNVFVV ERKDSEMVEA DDVRDSLLEL TRNPSRWHSE 300 IAKAEENGVG FDNHDHDHDH HLHLHNRHFN SFHLHHLPNE T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	84	105	RRRAGKGPQAKNLVAERKRRKK
2	99	106	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	5e-65	bHLH family protein