PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000376.1_g810.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 199aa    MW: 23126.9 Da    PI: 5.8105
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000376.1_g810.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.44.5e-1383137250
                        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k......k 50 
                                ppG+rF+P deelvv+yLkkkv + +l+  + i ev++y+++P+ L  k      k
  Pav_sc0000376.1_g810.1.mk  83 PPGYRFNPLDEELVVHYLKKKVLDLPLPP-NRIIEVNLYRHNPEFLAvKdspvrrK 137
                                9*************************999.6799************7335555431 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MEPVEQSHPH HKASVTSQVA SYRLINKQSH AQAHLTHELT QPNEPGNSFI TNVSAGTELS  60
DDESNSFNNN LKNEEDEFFD SFPPGYRFNP LDEELVVHYL KKKVLDLPLP PNRIIEVNLY  120
RHNPEFLAVK DSPVRRKRGE NDMRLDNWVL CRIYKKVDKN SKRCETRNHV EDSLSPQPQI  180
INGEGMEMEM EMRTLFDPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.14e-07NAC family protein