PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000383.1_g1160.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 224aa    MW: 25427.4 Da    PI: 7.8557
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000383.1_g1160.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.32.8e-164291255
                         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                ++ GVr+++ +grWvAeI+d s   ++ r +lg+f+ aeeAa a+++a++ l+g
  Pav_sc0000383.1_g1160.1.mk 42 RFLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRAEEAALAYDKAARLLRG 91
                                577******.7*********42...36***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MDSLDSTEVP ADDQFQTETF QENKERISAM RKVNSNNISG KRFLGVRQRP SGRWVAEIKD  60
SSQKLRLWLG TFDRAEEAAL AYDKAARLLR GRNAKTNFPC HIMNTHEENC SILRKNPRLY  120
QLLQHAIMKN HAIARSSSMK INPWDRNQIR GIDFDTLVEE TIVCSSSSNT SGQDHDDHED  180
RNKLCALSFG SCKVYSSVVV APSFSASSQT QCQQVHEEKG YQEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.19e-17ERF family protein