PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000383.1_g850.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family TCP
Protein Properties Length: 506aa    MW: 57580.8 Da    PI: 6.9544
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000383.1_g850.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP122.35.5e-382113733133
                        TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssa..sec.. 73 
                                 k+drhski T++g+RdRR+Rls+e+a++fF Lqd L fdk+skt+eWLl qa p+ik+l+g+         s+s+a  ++c  
  Pav_sc0000383.1_g850.1.mk 211 CKRDRHSKINTARGLRDRRMRLSLEVARKFFWLQDALHFDKASKTVEWLLIQATPEIKKLVGDckhmmsstkSTSPAtsESCev 294
                                69*************************************************************998887666333333233332 PP

                        TCP  74 .eaesssssasnsssg.........................kaaksaakskksqksaasalnlakesrakarararertrekmr 131
                                 +      +a+    +                          +ak+ +  +++ +++++++ l+k sr+kararare+ rek+r
  Pav_sc0000383.1_g850.1.mk 295 iS---GIDEAA----TntnihinidggnagddklirsceiqPSAKERKVARRQLSRKTAFHPLSKASREKARARAREKAREKQR 371
                                31...222222....123344668899999999*****9984444444444555555557**********************99 PP

                        TCP 132 ik 133
                                + 
  Pav_sc0000383.1_g850.1.mk 372 TH 373
                                76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    
LNSFNGSAHH QVVLKVQASP SLDQHPSPPT QPQQAKGGDI MFPSNSNNNL NNTGNELPVS  60
YPHVDQSFFH SRPFLHEVTT LIPNSLHPNL NSKQEEEQQQ QQQGPHHHLS PFFYIPSTFE  120
DDDVLLFQQH HHYDHQHDHV HDMPLHDTQQ APPITTMRET VAANNTLADD HRQTTTTSTT  180
LNIKMVDWDS NKNHGEMMNM DQPQIPRRRS CKRDRHSKIN TARGLRDRRM RLSLEVARKF  240
FWLQDALHFD KASKTVEWLL IQATPEIKKL VGDCKHMMSS TKSTSPATSE SCEVISGIDE  300
AATNTNIHIN IDGGNAGDDK LIRSCEIQPS AKERKVARRQ LSRKTAFHPL SKASREKARA  360
RAREKAREKQ RTHQRVVDVD DQSKKQSGDQ ENMSRLSSWS PFETGEESAG TQSHNNNNIN  420
INSLEGLVHH EIEEPMSSCQ PGDHPDLVVD HGTTHDPLVI MGKWSPPSIF SSLQQNIGIS  480
QEHHQFADFQ FFGKPWEVYN NTHNLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.24e-24TCP family protein