PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000405.1_g530.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 196aa    MW: 21271.4 Da    PI: 8.3091
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000405.1_g530.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.7e-1965115155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                + y+GVr++  +g+WvAeIr p   + r  r +lg+f ta eAa a+++a+++++g
  Pav_sc0000405.1_g530.1.mk  65 CNYRGVRQRT-WGKWVAEIRAP---N-RgSRLWLGTFPTAIEAALAYDEAARAMYG 115
                                56*****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MTKLVKTDPR QDGSNPVAET LAKWKAYNDH LDSCNDESKP IRRVPAKGSK KGCMKGKGGP  60
ENSRCNYRGV RQRTWGKWVA EIRAPNRGSR LWLGTFPTAI EAALAYDEAA RAMYGSAARL  120
NFPNISISNL SKDPSSRATL SAASSLVTSA GSESSGKSDH SEDCAAQGKV NYLSPNVENE  180
DTTTNRDQTN EDGEDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.23e-34ERF family protein