PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000424.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 295aa    MW: 32686.2 Da    PI: 5.2179
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000424.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1085e-34111172263
                     zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                                ++k l+cprC+s +tkfCy+nnys+ qPr+fCk+CrryWt+GG++rn+P+G+ r +nk+sss
  Pav_sc0000424.1_g010.1.mk 111 PDKVLPCPRCNSLKTKFCYFNNYSVYQPRHFCKSCRRYWTAGGTIRNLPLGTRRHRNKHSSS 172
                                78999****************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MSAVRDPAIK LFGRNIPVPE LQIPDMSVHN SNEECWVADM PIAAMGECRE MEDPSVKISC  60
KQDQFFELDK GSENNHHGQI LENEGEVDCN PEEDCIASDT DDGKEKAFTK PDKVLPCPRC  120
NSLKTKFCYF NNYSVYQPRH FCKSCRRYWT AGGTIRNLPL GTRRHRNKHS SSQYHQVVGE  180
PSAVPVTQGD TLNFVGQQHL SPVQLPASPK PVNGMREVLN SGTDTVLVES IATALNHKDQ  240
KRSSEDGSAA AGDNSEEPSS SSSSLTATTS QQNACLGKEM EQVDLPRYGN DYNLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.11e-39Dof family protein