PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000428.1_g330.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 317aa MW: 35424.7 Da PI: 6.42

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000428.1_g330.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	54.7	2.1e-17	169	206	22	59
EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 sYYrCt+++C vkk+vers +dp++v++tYeg+Hnh+ Pav_sc0000428.1_g330.1.mk 169 GSYYRCTTQKCVVKKRVERSFQDPSIVITTYEGQHNHQ 206 59***********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MSNEKKNPYQ YDPFDYNPHE INRTSFPFFN YGTPSIQDPQ NLHGFESDHP NSSFMSFTDC 60 LHGSMDYNTL SRAFDMSCSS SEVISPPLDH ENSKNQQAAA AAAGVGDHSV GTSTTENPST 120 PNSSVSSSSN EAAGSHEHED SEKKKKEKQP KVAVCDEAAG DEEDKSKKGS YYRCTTQKCV 180 VKKRVERSFQ DPSIVITTYE GQHNHQCPAT LRGNLNLNAV GMLSPNSLLT SASLNGSARF 240 QHEFLTQFLP MNNQLQLQLQ SRHHQDDHQA SNSMIYSNLV VPHPHHHQQQ HQRQQLHVPD 300 YGLLQDLVPS FGQKQEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29860.1	3e-22	WRKY family protein