PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000464.1_g130.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 118aa MW: 13537.8 Da PI: 10.1691

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000464.1_g130.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.6e-15	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ l ++++ +G g W ++ + g++R++ +c++rw++yl Pav_sc0000464.1_g130.1.br 15 KGAWTKEEDDVLRQCIENHGEGKWYQVPYKAGLNRCRRSCRLRWLNYL 62 79*********************************************7 PP
2	Myb_DNA-binding	33.3	1.1e-10	73	106	6	41
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqck 41 ++E +l+++++k+lG++ W++Ia +++ gRt++++k Pav_sc0000464.1_g130.1.br 73 EDEVDLIIRLHKLLGNR-WSLIAGRLP-GRTANDVK 106 8999***********.*****.****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 118 aa Download sequence
MANKKMEGYN LGVRKGAWTK EEDDVLRQCI ENHGEGKWYQ VPYKAGLNRC RRSCRLRWLN 60 YLKPNIKIGG FAEDEVDLII RLHKLLGNRW SLIAGRLPGR TANDVKIIGT LDCGRILA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-51	MYB family protein