PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000464.1_g250.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 244aa    MW: 28556.1 Da    PI: 6.2953
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000464.1_g250.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding483e-151057148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                               rg+WT eEd+ll ++++  G g W+ ++ + g++R++k+c++rw++yl
  Pav_sc0000464.1_g250.1.br 10 RGAWTREEDDLLRQCIENQGEGKWHQVPYKAGLNRCRKSCRLRWLNYL 57
                               89********************************************97 PP
2Myb_DNA-binding46.77.3e-1563106146
                                TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                                rg + ++E +l+++++k+lG++ W++Ia++++ gRt++++k++w++
  Pav_sc0000464.1_g250.1.br  63 RGDFMEDEVDLIIRLHKLLGNR-WSLIAQRLP-GRTANDVKNYWNT 106
                                678889****************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MEGYNLGVRR GAWTREEDDL LRQCIENQGE GKWHQVPYKA GLNRCRKSCR LRWLNYLKPN  60
IKRGDFMEDE VDLIIRLHKL LGNRWSLIAQ RLPGRTANDV KNYWNTRLRT DCCLKKMKDK  120
SQETIKTIIK RPQPRSFTKS SNCLSFKEPI LDDTQLEENF STPSQTSTST RIGSDWWETF  180
LDDKDATERA TGSGLGLDEE LLASFWVDDD MPQWTRTCIN FSEEGLSRGD FSFSMDLWNH  240
SNEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.12e-64MYB family protein