PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000467.1_g980.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 83aa    MW: 9872.26 Da    PI: 4.629
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000467.1_g980.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM331.7e-10876363
                        NAM  3 pGfrFhPtdeelvveyLkkkvegkk....leleevikevd.iykvePwdLpkkvka...eekewyfFsk 63
                                GfrF+Ptd+el++++L kk+ +k+       +++++e++ + ++ePw    ++ +    ++++yfFs 
  Pav_sc0000467.1_g980.1.br  8 LGFRFRPTDQELLSYFLYKKAITKDplmaSYYSNFVHEFNfLGETEPWVVWDQFGGpglVDEDLYFFSM 76
                               6*******************8888867643334579999736799****974443333366789**986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
MAKYNRLLGF RFRPTDQELL SYFLYKKAIT KDPLMASYYS NFVHEFNFLG ETEPWVVWDQ  60
FGGPGLVDED LYFFSMLPTG TYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32770.16e-07NAC family protein