PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000480.1_g1210.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 165aa MW: 19448.1 Da PI: 9.3987

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000480.1_g1210.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	65.9	1.2e-20	8	140	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkk....leleevikevd.iykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr. 76 GfrF+Ptd+el++++L kk+ +k+ +++++e++ + ++ePw ++ + ++++yfF++ ++ +++gkr +r Pav_sc0000480.1_g1210.1.br 8 LGFRFRPTDQELLSYFLYKKAITKDplmaSYYSNFVHEFNfLGETEPWVVWDQFGGpglVDEDLYFFTQLKNLSQNGKRIKRk 90 6*****************8888867643334579999736799*74443333367899**************5 PP NAM 77 atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + g+W++ ++ +v++k +g+ +g k+ L + ++ + +W+++ey+l Pav_sc0000480.1_g1210.1.br 91 IEAGGTWSEAFSK-KVYDKtTGNPIGQKRNLRYE--NQGCEYHGKWLLEEYSL 140 55589998875.5555549999******98..34444689*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MAKYNRLLGF RFRPTDQELL SYFLYKKAIT KDPLMASYYS NFVHEFNFLG ETEPWVVWDQ 60 FGGPGLVDED LYFFTQLKNL SQNGKRIKRK IEAGGTWSEA FSKKVYDKTT GNPIGQKRNL 120 RYENQGCEYH GKWLLEEYSL LNITKHLAAS FYSCLFSQHS RSNFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	2e-10	NAC family protein