PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000484.1_g400.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 337aa    MW: 38018.3 Da    PI: 4.1423
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000484.1_g400.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.3e-194594255
                        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Pav_sc0000484.1_g400.1.mk 45 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 94
                               789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MARKRKVSDG VEDRSSSEGT MAWDEMVKEA SAAAELGGAR RARKRFVGVR QRPSGRWVAE  60
IKDTIQKIRV WLGTFDTAEE AARAYDEAAC LLRGANTRTN FWPCSHSPSS TPALPSKITN  120
LLLQRLKARN NSSSCSAPSA PLPINHHQMQ QHADHQEEEA GADFSETQYT DFLNDPEDYI  180
TSNNHDIISA SSIDYMTSSF ESCLTEKEEY STARETDQMD YGNLSEVAQI YSGGDANFVG  240
EGSEEDMDQE EEEEVNDQVG VIDFQFVDDI GASNYYSPSP FEIAEEIEEP VESETYADEP  300
SMLRAAMKRM KYERNILSDQ KEEDVQREDF TWTDEEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-23ERF family protein