PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000488.1_g560.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 192aa MW: 21868.5 Da PI: 5.1665

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000488.1_g560.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.5	5.2e-32	103	157	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp LH++Fv+a++qLGG++kAtPk++l+ m+vkg+tl+h+kSHLQkYRl Pav_sc0000488.1_g560.1.mk 103 KPRLRWTPHLHACFVDAINQLGGPHKATPKKLLQKMGVKGITLYHLKSHLQKYRL 157 79****************************************************8 PP
2	Myb_DNA-binding	57.2	3.8e-18	105	156	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+ ++ +vda++qlGg+ t+k+ ++mg kg tl+++ks++qky+ Pav_sc0000488.1_g560.1.mk 105 RLRWTPHLHACFVDAINQLGGPhkaTPKKLLQKMGvKGITLYHLKSHLQKYR 156 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MFHRRGGGGG SGVPNHTYNS QLLQAAALQP QEEEEEKERM VGYGFDYFGD DEQDFQGPPT 60 PTVTQSDDSV VVEGEEEDEE EEEEEEDLSH DLQTPSVLSS NFKPRLRWTP HLHACFVDAI 120 NQLGGPHKAT PKKLLQKMGV KGITLYHLKS HLQKYRLGKY SVKEWKEVPE TCKFLIKTSK 180 CKNIPLNEFF CK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	3e-29	G2-like family protein