PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000491.1_g500.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 208aa    MW: 23408 Da    PI: 3.8315
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000491.1_g500.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.72.6e-084070131
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                               +g+WT eEd  l d+++ +G g+W++ a + 
  Pav_sc0000491.1_g500.1.mk 40 KGPWTVEEDSVLFDYINIHGEGRWNSLAGHA 70
                               79************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MDMADVHVHD HVRAGYGSSA ASAETHDQIP SEEEDVDLRK GPWTVEEDSV LFDYINIHGE  60
GRWNSLAGHA DAMRYVWIPR LIERIQALPQ SLPGQSSHES TDLTTASESQ YWIDSNFMPE  120
TSGSSSSESS DQLQVCSIPD PTTTDQFMNY PSTNQYGSDN QNGTNSDFLG FEQSNYWSSS  180
GGDLSVENLW NEENIWFLQQ QLSDDQWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.14e-13MYB family protein