PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000502.1_g250.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 200aa    MW: 22258.2 Da    PI: 5.6226
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000502.1_g250.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.6e-191665255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               +y+GVr +k +g+Wv+eIr+p   gk++r++lg++  +e+Aa+a++aa++ l+g
  Pav_sc0000502.1_g250.1.mk 16 RYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYEEPEMAAAAYDAAALHLRG 65
                               69****999.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MEPPAADCHH VPSSARYRGV RKRKWGKWVS EIREPGKKTR IWLGSYEEPE MAAAAYDAAA  60
LHLRGRGAVL NFPELVDSLP RPASSSPMDV QLAAQEAALR VRRLRMGAVS TEVAGDSSSP  120
RDLSSMPVTV GLSPSQIQAI NESPLDSPKL WMRYMYRAHC HEGLSLLGDD MSCVEYYDEE  180
VELGGECENI QHLSIWDSYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.17e-48ERF family protein