PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000502.1_g270.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 200aa    MW: 21814.7 Da    PI: 5.7152
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000502.1_g270.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.8e-183787155
                        AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                               + ykGVr +k +g+Wv+eIr+       + +r++lg+f t+e+Aa+a++ a++ ++g
  Pav_sc0000502.1_g270.1.mk 37 PSYKGVRKRK-SGKWVCEIRVlG-----TkTRIWLGSFETPEMAAAAYDVAALHFRG 87
                               57*****999.7*********66.....34**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MQMQMSESMM FSVSSNLKYC ACMGEPNSSN AYGAASPSYK GVRKRKSGKW VCEIRVLGTK  60
TRIWLGSFET PEMAAAAYDV AALHFRGLEA SLNFPQLVSS MPRPASSNAE DIRMAAHEAA  120
LRLRSSPAAE AHETGSSSSN VGPITVRLSP NQIQAINESP LDSPKMWMQM SESMMFSSAF  180
EDQLEGLQND SLWDPSVTST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14046KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-56ERF family protein