PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000502.1_g280.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 123aa    MW: 13381.8 Da    PI: 10.6024
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000502.1_g280.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.2e-191565155
                        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               s ykGVr++k +g+Wv+eIr+p   g ++r++lg+f t+e+Aa+a++  ++ ++g
  Pav_sc0000502.1_g280.1.mk 15 SSYKGVRQRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDVVALHFRG 65
                               67*******9.**********8...325*********************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MGEPNSSNAY GAASSSYKGV RQRKWGKWVS EIREPGTKTR IWLGSFETPE MAAAAYDVVA  60
LHFRGREARL NFPELVNSLP RPASSNAEDI RRAAHEAALR RRSSPAAEAH EAGSSSSNVG  120
PSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-41ERF family protein