PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000502.1_g400.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 166aa    MW: 17935.7 Da    PI: 5.2403
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000502.1_g400.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.45.7e-161867255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                               ++kGVr++k +g+Wv+eIr+p   g +  r +lg+f ++e Aa a++ a  +l+ 
  Pav_sc0000502.1_g400.1.mk 18 KFKGVRQRK-WGKWVSEIRVP---G-TqDRLWLGSFSSPEAAAVARDIAYYCLRR 67
                               89******9.**********8...3.35************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MSYSSEESSS SPGTGQRKFK GVRQRKWGKW VSEIRVPGTQ DRLWLGSFSS PEAAAVARDI  60
AYYCLRRPST LEGLNFPLVL PSSVHADMSP RSIQKAASDA GMAVDAQFVA NRSPQAGGGQ  120
SNNGSHGVES EVWEDMGESS RSNWGGHMGF GNGCEDLSIS IEDYDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.13e-46ERF family protein