PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000503.1_g740.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 708aa    MW: 77329.7 Da    PI: 5.1189
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000503.1_g740.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like734.3e-23183236155
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                k +++Wt++L +rF+eav  + G ekA+Pk+ile+m+v+gLt+++++SHLQkYR+
  Pav_sc0000503.1_g740.1.mk 183 KHKVEWTSQLQARFLEAVYCI-GLEKAVPKRILEVMNVEGLTRANIASHLQKYRM 236
                                6799*****************.********************************7 PP
2Myb_DNA-binding23.81.1e-07186235248
                                SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                  WT +++ ++++av   G +   +k+I + m+ +g+t+ ++ s++qky+
  Pav_sc0000503.1_g740.1.mk 186 VEWTSQLQARFLEAVYCIGLEkaVPKRILEVMNvEGLTRANIASHLQKYR 235
                                68*****************99****************************7 PP
3Response_reg37.21.6e-13271201102
                                EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH...HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTT CS
               Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealell...kekdpDlillDiempgmdGlellkeireeepklpiivvtahg 81 
                                vl+vdD+  ++  +  +l+  +  ev +++++  al ++   +e ++Dli+ D+ +p++ Gl++++++ree+ klp        
  Pav_sc0000503.1_g740.1.mk  27 VLVVDDDAEFLTFISGLLKLLKH-EVVTMRNPIHALSTTlllEEDKFDLIMADLYLPNVAGLQVIRRLREES-KLP-------- 100
                                89*****************9999.8899999999988766668888************************98.443........ PP

                                THHHHHHHHHTTESEEEESS- CS
               Response_reg  82 eeedalealkaGakdflsKpf 102
                                 e+++l+al+ Ga  +++Kp+
  Pav_sc0000503.1_g740.1.mk 101 -ESTILAALEHGATHYIVKPV 120
                                .67777888888888888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 708 aa     Download sequence    
MYGDKSLQGS QSDLIMNTSS YPKKLRVLVV DDDAEFLTFI SGLLKLLKHE VVTMRNPIHA  60
LSTTLLLEED KFDLIMADLY LPNVAGLQVI RRLREESKLP ESTILAALEH GATHYIVKPV  120
CFSDVRNLWQ FVVGGNEGTR NPHIVVEQIG SVSGESSSSS NGDSNSKRKR PSQGGKDFTS  180
IKKHKVEWTS QLQARFLEAV YCIGLEKAVP KRILEVMNVE GLTRANIASH LQKYRMFLRK  240
VAGRIAVSKL SMDLSQHTRR SLLNQNIPGK KPTTPDEPIS LRDNFELSVK PNASNLSLLG  300
RRPNDQEATS SGSPPQSGYI TGHPYLPYAA SKFANLPLMS STPNALQPAA NCSGFQSNNA  360
QGNLSTTNPS PKLISTDIPY SFGRNSANGV HIGTNLVHMY QQKAQETPQP FTTTGNGNSN  420
NASWNNSNVM TSYTNNSYGT GMQMTITSSD GGGRLAGQMA PTQTVFNNVG WDSNGVNNNC  480
GDLLINNGTQ NDDQNRNVLQ VENVVFGYDF PQKESSSSHG FSGSRCSQFS PILAEGNNAG  540
QGNVNVSELD QIVQQCSALF SSSNNSSQVT VVDSSSSSTE ISSSYQKDND DAFDLSVLLF  600
NELHLESINN DQVKRKQAMD SAKDTDDDFD LFLNENHFGN VNDDDKGKGK QVMNFDPSAS  660
VVQESSPLNK ESLAQFDGDG DGDGLNMASP ENLSLDEDWE NIVESLFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.18e-37ARR-B family protein