PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000506.1_g360.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 282aa    MW: 30821.6 Da    PI: 6.1739
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000506.1_g360.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY985.9e-3187145259
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++++itY++eHnh+
  Pav_sc0000506.1_g360.1.mk  87 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPSMLVITYSSEHNHP 145
                                69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDSTFFNSSN SNSRSKQFMS DQEENDNTTS STPENSSGSP PPPSTNFSDF SKITSTSSPK  60
KSTRRAIQKR VVSIPIKGDN SNTPPPSDSW AWRKYGQKPI KGSPYPRGYY RCSSSKGCPA  120
RKQVERSRVD PSMLVITYSS EHNHPWPASR NHHNHHQSNS SSSAAAAAVT NKPGSAKTQA  180
REAQQPEHQD HDPTFADLND ESLITHDEFG WFADMETTSS TVLESPIFAE SGCAGGADSA  240
DMAAMVFPMG EEDESLFADL GELPECSLVF RHRGVGPQVQ IC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-71WRKY family protein