PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000549.1_g1080.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 350aa    MW: 39024.7 Da    PI: 5.5696
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000549.1_g1080.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20199249255
                         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                                 +y+GVr+++ +g+++AeIrdp   + +  r++lg+f+ta eAaka+++a+ kl+g
  Pav_sc0000549.1_g1080.1.mk 199 HYRGVRQRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAIEAAKAYDRAAFKLRG 249
                                 8********.**********9...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MALSSDMAGF DQVSALELIK NHLLGEFSPA AKSSVTELSD SASSFPQNQW SPDANSDLSR  60
SQSDSLCSKS SSTFDSSIEI SDYLNSNEIF EFEFNSTDFL DFEAKPQVID LTTPKSGDLR  120
SQNSFEFESK PQISDDFFEF EQKPQILNKT APKPANPTRK PALTVSLPNK TEWIHFASSD  180
RAAKVPVQKS SSNEEKKKHY RGVRQRPWGK YAAEIRDPNR RGSRVWLGTF DTAIEAAKAY  240
DRAAFKLRGS KAILNFPLEA GKAEPVAAVE RKRRREEDKE EVKAVAVKKE RLTEAPEAVG  300
FTRDMPLTPS SLTAFWDSES FEDVKGIFNV PPLSPLSPHP AMGYPQLMVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1271275RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.14e-68ERF family protein