PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000554.1_g1690.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 200aa    MW: 23722.1 Da    PI: 9.6557
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000554.1_g1690.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like47.63.6e-15124170550
                     G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkv.kgLtlehvkSHL 50 
                                  Wtpe He+ veav qLGG  kAt k+il+l++   gLt+  vk HL
  Pav_sc0000554.1_g1690.1.mk 124 SWTPEYHEKLVEAVIQLGGLGKATAKRILKLVEHhRGLTIRAVKYHL 170
                                 7*******************************8626**********9 PP
2Myb_DNA-binding28.14.7e-09124173347
                                 SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT..TTS-HHHHHHHHHHH CS
             Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg..kgRtlkqcksrwqky 47 
                                 +WT+e +e+lv+av qlGg    t k+I + +    g+t   +k ++  +
  Pav_sc0000554.1_g1690.1.mk 124 SWTPEYHEKLVEAVIQLGGLgkaTAKRILKLVEhhRGLTIRAVKYHLSVL 173
                                 5*****************88**************************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MEVDGENHDE GLERNYQRRP QTQRRSRVEA IEWTLEHHKL FVDAMIRLDL GDLTVRTPRR  60
TILMVELMNN EAFRLIPRST LLLHIFHFQR FRSNQKASAH SVLMRDLERL NINKEEEEED  120
SAFSWTPEYH EKLVEAVIQL GGLGKATAKR ILKLVEHHRG LTIRAVKYHL SVLKDLQKRT  180
QTFQEKIHSL SYERYTSNLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.12e-10G2-like family protein