PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000563.1_g180.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 351aa    MW: 38202.6 Da    PI: 6.1853
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000563.1_g180.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like955.7e-30153206155
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  Pav_sc0000563.1_g180.1.mk 153 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 206
                                59*******************.********************************8 PP
2Myb_DNA-binding48.22.5e-15155205148
                                TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
  Pav_sc0000563.1_g180.1.mk 155 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 205
                                789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MGEEVRMSEY EGGGSGGDDE TRVFEWEAGL PSADDLTPLS QPLIPIELAS AFSISPEPCR  60
TAVDVNRASQ KTVSTLRGAA HSQGFSSNYK SFDENRSDDV EPMVVEVDEN DRYGNAGSDS  120
RNSRKIDCTE EADSALRTEN FSADDTSART LKRPRLVWTP QLHKRFVDVV AHLGIKNAVP  180
KTIMQLMNVE GLTRENVASH LQKYRLYLKR MQGLSGDVGP SSSDQLFAST PVPQSLQQES  240
GGGSGQAGQS HGHGNGQFSF SMPYPPTMMS MPVLGLTHGH GHMGMPGGGY HGFESHHYNM  300
GSMVSYPHDC TVVKFTMVLP WRNNGTLALK LALLYQGFIA ASGIQKFQQV G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.22e-75G2-like family protein