PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000583.1_g490.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 156aa    MW: 17125.5 Da    PI: 5.306
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000583.1_g490.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.7e-191969255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                               +y+GVr ++ +g+++AeIrd +    + +r +lg+f ta+eAa+a+++a+ +++g
  Pav_sc0000583.1_g490.1.mk 19 KYRGVRIRP-WGKFAAEIRDSTR---QgARLWLGTFNTAQEAARAYDRAAFSMRG 69
                               8********.**********322...24*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MEGGQSRGKA REEGQRDVKY RGVRIRPWGK FAAEIRDSTR QGARLWLGTF NTAQEAARAY  60
DRAAFSMRGP LAILNFPSEY GLPEVDHSTS AASSSSSSSS SSSSSSSSSS NFSSSSTLHN  120
NVTTRTETGR EIFEFEYLDD SVLEDLLDFD NKSKSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.19e-30ERF family protein