PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000583.1_g500.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 179aa MW: 21056.9 Da PI: 10.8967

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000583.1_g500.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.4	8.5e-19	40	87	1	51
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 ++y+G+r+++ +g+++AeIrdps ng +r +lg+f taeeAa+a+++a+ Pav_sc0000583.1_g500.1.mk 40 PRYRGIRRRP-WGKFAAEIRDPSRNG--ARLWLGTFETAEEAARAYDRAAF 87 68******.******98887..*******************96 PP
2	AP2	61.1	2.6e-19	117	169	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++y+G+r+++ +g+++AeIrdps ng +r +lg+f taeeAa+a+++a+ ++g+ Pav_sc0000583.1_g500.1.mk 117 PRYRGIRRRP-WGKFAAEIRDPSRNG--ARLWLGTFETAEEAARAYDRAAFGFRGH 169 68******.******98887..********************988886 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MSQPIFLPPN LNKDFLFLLN MEGKKVENQQ KEQTKVRDQP RYRGIRRRPW GKFAAEIRDP 60 SRNGARLWLG TFETAEEAAR AYDRAAFGFR DFLFLLNMEG KKVENQQKEQ TKVRDQPRYR 120 GIRRRPWGKF AAEIRDPSRN GARLWLGTFE TAEEAARAYD RAAFGFRGHL AILNFPNDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23230.1	9e-29	ERF family protein