PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000583.1_g510.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 209aa    MW: 23743.8 Da    PI: 6.5162
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000583.1_g510.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.9e-1867117255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                 y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +l+g
  Pav_sc0000583.1_g510.1.mk  67 SYRGVRRRP-WGKYAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFALRG 117
                                69*******.**********422...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MMSFLPFDMN DSEEMLLYDA VAKGAKETFS SHDDQANCFN KVVKEEEVTS NIAHHQAFEE  60
KPTKEKSYRG VRRRPWGKYA AEIRDSTRHG IRVWLGTFDS AEAAALAYDQ AAFALRGSLA  120
VLNFPAQVVQ ESLQDIKYKH DEGCSPVVAL KRKHSMRRKS MSKKSKAIIS QQCTEQRVKE  180
VSPQNNVMVF EDLGAEYLEE LLEQSSCEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.18e-50ERF family protein