PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000586.1_g200.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 201aa    MW: 22576 Da    PI: 6.5057
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000586.1_g200.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22.1e-183787155
                        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f  +e+Aaka++ a+ +l+g
  Pav_sc0000586.1_g200.1.mk 37 PVYRGVRKRR-WGKWVSEIREPRK---KSRIWLGSFPVPEMAAKAYDVAAYCLKG 87
                               68*****887.**********843...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MEMEQTPYTK DDLSTTSTST TTTTQKSDLQ HAATRHPVYR GVRKRRWGKW VSEIREPRKK  60
SRIWLGSFPV PEMAAKAYDV AAYCLKGQKA QLNFPEDIEH LPRPSTCTAR DIQAAAAKAA  120
HTMKSNSTTP KEHDHHHHHD HDGLDGDDDF WGEIELPELM NSGCHWNSSC GWNTTAFSGD  180
AAAWPEGEAP QQFMGMVLVS D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.19e-55ERF family protein