PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000586.1_g500.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 278aa MW: 30446.5 Da PI: 8.0838

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000586.1_g500.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.9	1.3e-39	38	98	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkks+ Pav_sc0000586.1_g500.1.mk 38 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKKST 98 6899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MDTAQWPQES GELDKPMEDH EMGSNACPRS ALEKRARPQE QLNCPRCNST NTKFCYYNNY 60 SLTQPRYFCK TCRRYWTEGG TLRNVPVGGG SRKNKKSTSS SASSSASLLS KNNIPDLNPP 120 SSLSHFSAHQ NPRSTHEGQD LNLAFNAMEH YQQNPAAGAS TSTSAPLSAM ELLRTGIASR 180 GVNSFIPTQN MADHSNTLYA SSPGFSLQEF KPNLGFCVDG LGNRYGDHEI NGGRLLFPFG 240 DLKQISSSTA HHELDHHQNK GQGNPTGYWN GLLGGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.2	3e-55	Dof family protein