PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000586.1_g700.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 91aa    MW: 10697 Da    PI: 7.1217
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000586.1_g700.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.0011425323
                               ETTTTEEESSHHHHHHHHHH.T CS
                    zf-C2H2  3 CpdCgksFsrksnLkrHirt.H 23
                               C+ C++   +k++L++H  + H
  Pav_sc0000586.1_g700.1.br  4 CNLCDYQSVNKDDLNKHVELrH 25
                               *****************98877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MGDCNLCDYQ SVNKDDLNKH VELRHTNCDI YRCYLCGREI EKKNGFVLHG EKVHQKEYDG  60
QFMCPLCWKV YFTQADKDEH SCHGNHGRRS G