PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000589.1_g290.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 312aa    MW: 33221.4 Da    PI: 6.8541
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000589.1_g290.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-182373256
                        AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                               ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a+++l+g+
  Pav_sc0000589.1_g290.1.mk 23 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARALRGA 73
                               689******.7*********....4456*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MGLRAQNDGV RGRRKSSTRG HHRFVGVRQR PSGRWVAEIK DSLQKVRLWL GTFDTAEDAA  60
RAYDDAARAL RGANARTNFE LPQSTNGSGH ANGGAGVAEN VEPFSFEAVC GNGAEADGLL  120
GALRAKLLDG KGCVVPQPRG NNGGAKMEPS PIGPRGVVGF VNPNRHPSSS WSAKEDPIVL  180
DINGHDHRWG HHQAQPSHTA SNQSIAWSNE SPALAYDQVP NWSTWSTQTD SFTEQCPMEL  240
PLQITSLAGD GKVTAASTQQ LSQIDGSAIL GSSTSGAWSS DQQQFLHCDN NWAAGGANAS  300
WDPLFYASSV LG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.18e-16ERF family protein