PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000598.1_g620.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 168aa    MW: 19870.6 Da    PI: 11.0947
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000598.1_g620.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.52.8e-071045339
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39
                               +WT  E e l++avk++ +++W+++ar++  +R   +
  Pav_sc0000598.1_g620.1.mk 10 PWTVGENEELIEAVKRYVTHRWEAVARCIV-TRKNAN 45
                               8****************************9.775555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MKFKNLPGRP WTVGENEELI EAVKRYVTHR WEAVARCIVT RKNANIENLW PRKILKLLRK  60
SQLITELVGI LRLLGFFSFF GEFLAKKDHQ ASPKKPAHHR YAFLELFNLI SGSRIVIRSL  120
VLCLLRIGWD FEVMEFFLFS ENFWPRRIIK LLRKSQPITG MHFLGFSI