PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000622.1_g470.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 389aa MW: 42292.5 Da PI: 5.581

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000622.1_g470.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.8	3.9e-32	228	285	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k Pav_sc0000622.1_g470.1.mk 228 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 285 8**************************************.*************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MDATTLDHPS GPSDDFDPGL TGFNSGSDPT LFSSTGGGGG AKYKLMSPAK LPISRSPCLT 60 IPPGLSPTSF LESPVLLSNM KAEPSPTTGS FLKPQMVYGS LSSTTYSATT MCSDFDTFDE 120 RNSGSFEFKP HAGSNMVTTD YNHQRNDQLV QGQAQPQSLV SPPLVKSEMA VSSNELSLSA 180 PVHMVTSGAS APAEGDSDDL SQRGHPNPGV QTSQFDHKGS GPSVISSDDG YNWRKYGQKH 240 VKGSEFPRSY YKCTHPNCEV KKLFERSHDG QITEIIYKGT HDHPKPQPSR RYNTGAMMPI 300 QEERSEKASS LIGRDDKPSS IYGQMSSTNE PNSTPERSPV TGNDDSVEGT GSLSNRMAEE 360 IDDDDPFSKR RYRDSRNAYV FPVLFMFPN

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MDATTLDHPS GPSDDFDPGL TGFNSGSDPT LFSSTGGGGG AKYKLMSPAK LPISRSPCLT  60
IPPGLSPTSF LESPVLLSNM KAEPSPTTGS FLKPQMVYGS LSSTTYSATT MCSDFDTFDE  120
RNSGSFEFKP HAGSNMVTTD YNHQRNDQLV QGQAQPQSLV SPPLVKSEMA VSSNELSLSA  180
PVHMVTSGAS APAEGDSDDL SQRGHPNPGV QTSQFDHKGS GPSVISSDDG YNWRKYGQKH  240
VKGSEFPRSY YKCTHPNCEV KKLFERSHDG QITEIIYKGT HDHPKPQPSR RYNTGAMMPI  300
QEERSEKASS LIGRDDKPSS IYGQMSSTNE PNSTPERSPV TGNDDSVEGT GSLSNRMAEE  360
IDDDDPFSKR RYRDSRNAYV FPVLFMFPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-108	WRKY family protein