PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000624.1_g520.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 286aa    MW: 31070.1 Da    PI: 10.5227
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000624.1_g520.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.71.8e-31212270259
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                +D+++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+++dp+++++tYegeH+h+
  Pav_sc0000624.1_g520.1.mk 212 SDEFSWRKYGQKPIKGSPYPRGYYKCSSVrGCPARKHVERAQDDPTMLVVTYEGEHRHP 270
                                69*************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MAIDLVGFSR IDDRTAMEEA ASAGLQSMDH LIRVLSNQTP SQTQTQTPLD CREITDFTVS  60
KFKQLISVLN RTGHARFRRG PANQSSTPVQ PVQPKPQTIS SAFSVPKSNN DDSLTLSPPI  120
STTSSFLSSI TIGDGSVSNG KAISSILAPP APAFSAGKPP LSQSHRKRCH DNDVAAKTSS  180
SGRCHCSKRR KSKVKRTIRV PAISSKIADI PSDEFSWRKY GQKPIKGSPY PRGYYKCSSV  240
RGCPARKHVE RAQDDPTMLV VTYEGEHRHP HPSITAGSVG LVFQST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.12e-94WRKY family protein