PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000636.1_g210.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

E2F/DP

Protein Properties

Length: 360aa MW: 39829.6 Da PI: 5.4574

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000636.1_g210.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	68.3	9.7e-22	86	186	2	71
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse...................................dvknkrRRiYDi 49 ++++Lr++++k ++ek+e+ g++t+ne ++ ++ d+kn+rRR+YD+ Pav_sc0000636.1_g210.1.mk 86 SGRGLRQFSMK---VCEKVESkGRTTYNESLVQM-HDliatedgiisevadelvaefadpsngvtspdqqqyDEKNIRRRVYDA 165 689******...9999***99999.6689999************************************** PP E2F_TDP 50 lNVLealnliekkekneirwkg 71 lNVL+a+++i+k +k+ei+wkg Pav_sc0000636.1_g210.1.mk 166 LNVLMAMDIISK-DKKEIQWKG 186 ********.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MGTRSQQPSR ERADVDDDMA GQSVSMSGSV GSPSSRSEQT MATPAGDTNF LRLNHPDVHG 60 DDAGSQGAVG SKKKKRGQRA VAGDKSGRGL RQFSMKVCEK VESKGRTTYN ESLVQMHDLI 120 ATEDGIISEV ADELVAEFAD PSNGVTSPDQ QQYDEKNIRR RVYDALNVLM AMDIISKDKK 180 EIQWKGLPRT SLNDIEELKT ERLGLRNRIE KKASYLQELE EQYVGLQNLI QRNEQLYHSG 240 DALSGGVALP FILVQTRPHA TVEVEISEDM QLVHFDFNST PFELHDDNYV LKAMKFCERP 300 QADDGTQNLT ADGGEGCSMS GMYQPQIPLP SLLNTPVRPP TSPPIPGILK ARVKHEHHGQ

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MGTRSQQPSR ERADVDDDMA GQSVSMSGSV GSPSSRSEQT MATPAGDTNF LRLNHPDVHG  60
DDAGSQGAVG SKKKKRGQRA VAGDKSGRGL RQFSMKVCEK VESKGRTTYN ESLVQMHDLI  120
ATEDGIISEV ADELVAEFAD PSNGVTSPDQ QQYDEKNIRR RVYDALNVLM AMDIISKDKK  180
EIQWKGLPRT SLNDIEELKT ERLGLRNRIE KKASYLQELE EQYVGLQNLI QRNEQLYHSG  240
DALSGGVALP FILVQTRPHA TVEVEISEDM QLVHFDFNST PFELHDDNYV LKAMKFCERP  300
QADDGTQNLT ADGGEGCSMS GMYQPQIPLP SLLNTPVRPP TSPPIPGILK ARVKHEHHGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-146	E2F/DP family protein