PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000636.1_g570.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 356aa MW: 39238.6 Da PI: 9.1636

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000636.1_g570.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.4	7.1e-25	88	132	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ Pav_sc0000636.1_g570.1.mk 88 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 132 79****************************************986 PP
2	QLQ	68.5	1.5e-23	26	62	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FTa+Q+q+L++Q+l++Ky++a++PvPp+L+++iqk Pav_sc0000636.1_g570.1.mk 26 SPFTASQWQELEHQALIFKYMMAGMPVPPDLVLPIQK 62 89*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MNTCATGGGG GGGGGGGAAG MTGMRSPFTA SQWQELEHQA LIFKYMMAGM PVPPDLVLPI 60 QKSFESISQR FFHHPTMGYC SFYGKKVDPE PGRCRRTDGK KWRCSKDAYP DSKYCERHMH 120 RGRNRSRKPV ESQTMTQSSS TVTSLTVTAS SSGTGSFQNL PLNAFGNTQG TSSGTNQSHY 180 QIDSIPFGIP NKDYRYLQGL KPEIGEHSFL SDASGSNRGL QMDSPLDSTW PLMPSRVGSF 240 PASKSGDGSI LHHDYPQHSF FNNAFPLESV KQEGQSLRPF FDEWPKGRDS WSGLEDERSN 300 QTSFSTTQLS ISIPMTSSDF SATSPRSPRG EFQRREGFIV ERRESCFGKS RLGKVV

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MNTCATGGGG GGGGGGGAAG MTGMRSPFTA SQWQELEHQA LIFKYMMAGM PVPPDLVLPI  60
QKSFESISQR FFHHPTMGYC SFYGKKVDPE PGRCRRTDGK KWRCSKDAYP DSKYCERHMH  120
RGRNRSRKPV ESQTMTQSSS TVTSLTVTAS SSGTGSFQNL PLNAFGNTQG TSSGTNQSHY  180
QIDSIPFGIP NKDYRYLQGL KPEIGEHSFL SDASGSNRGL QMDSPLDSTW PLMPSRVGSF  240
PASKSGDGSI LHHDYPQHSF FNNAFPLESV KQEGQSLRPF FDEWPKGRDS WSGLEDERSN  300
QTSFSTTQLS ISIPMTSSDF SATSPRSPRG EFQRREGFIV ERRESCFGKS RLGKVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-45	GRF family protein