PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000648.1_g320.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 257aa MW: 30020 Da PI: 6.3161

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000648.1_g320.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.4	7.5e-26	80	170	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +fY +Y+++ GF+vr++++++s++n ++ ++fvCs+eg+r+++ +++ + ++tr gC a+l+v +++ +kw+vtk+++ Pav_sc0000648.1_g320.1.mk 80 DFYIAYGRHSGFTVRIHHNRRSRMNSMVIGQDFVCSREGFRDKKYVCrEDRVLPPPPVTREGCAAMLRVALRDGEKWVVTKFVK 163 6***************************************998772333344899*********************** PP FAR1 84 eHnHela 90 eHnH+l+ Pav_sc0000648.1_g320.1.mk 164 EHNHKLM 170 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MESKANNISF DSDESERCLE FESCDEHLLI DYDELPKDID LCSLEVDKII QQPNASLPLM 60 GNAVEPYIGM GFKSRDDARD FYIAYGRHSG FTVRIHHNRR SRMNSMVIGQ DFVCSREGFR 120 DKKYVCREDR VLPPPPVTRE GCAAMLRVAL RDGEKWVVTK FVKEHNHKLM APSKVPWRGF 180 GKNLIREDEK DQKIRDLTIE LSNERQRCKR RCAAYQEQIS MLLKDIQEHS DHLSTRVQDI 240 VRNIRELENE QCVDSEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	210	RQRCKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	6e-42	FAR1 family protein