PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000648.1_g340.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 217aa MW: 25017.4 Da PI: 9.6263

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000648.1_g340.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	97	2.1e-30	48	135	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+++ k+ +++r++ra tr gCka+++vkkek+gkw vt++++eH Pav_sc0000648.1_g340.1.mk 48 FYDAYATHLGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKTRPKR-SENRKPRAITREGCKAMIVVKKEKSGKWIVTRFVKEH 130 9*****************************************99.9******************************** PP FAR1 86 nHela 90 nH+l+ Pav_sc0000648.1_g340.1.mk 131 NHPLV 135 *96 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MDEQSSMSKD EDVIEGSNGK DAVTSEGNSD MEPYVGMEFE SEEAAKVFYD AYATHLGFIM 60 RVDAFRRSMR DGKVVWRRLV CNKEGFRKTR PKRSENRKPR AITREGCKAM IVVKKEKSGK 120 WIVTRFVKEH NHPLVVTPAN GRRTVLLSQT PDEKDVKIRE LMAELQRERK RSAAYQEQLD 180 MVLREMEEHS NHLSRNIDGI VQSVKEIESK RVAPSNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	7e-98	FAR1 family protein