PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000652.1_g680.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 243aa    MW: 28008.8 Da    PI: 9.2563
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000652.1_g680.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.73.6e-12137183455
                                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                +h e+Er+RR+++N++f  Lr+++P+       K++ ++ L  Av YI++L+
  Pav_sc0000652.1_g680.1.mk 137 THVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 183
                                89************************6.....5*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MMIQDIVARV PYGFTSEEAM RMAMEDIISP CSSPNFCEEN SATFQQRLQF IVQNRPEWWA  60
YSIFWQASKD SNDQVVLSWA GGHFKSSRDF ASKRSNKMTS NYQPKFGFSN VERKKENNRE  120
VDRGRSSNHG TGRELSTHVE AERQRREKLN HRFYVLRSVV PNVSKMDRSS LLADAVAYIN  180
QLKQKVEELE AKIHAQPQNP KVGHLMIQDV VARVPYGFNS EEAVKMGIIK KCCCCCNLNK  240
FNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01260.11e-23bHLH family protein