PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000661.1_g290.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 124aa MW: 13761.5 Da PI: 10.6788

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000661.1_g290.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	94.8	6.5e-30	6	58	3	55
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rl Wt+eLH++Fve+++ LGG+ +AtPk+i+e+m+v+gLt+++vkSHLQkYRl Pav_sc0000661.1_g290.1.br 6 RLSWTQELHTKFVEVLSMLGGPAEATPKQIREAMQVEGLTNDQVKSHLQKYRL 58 9***************************************************8 PP
2	Myb_DNA-binding	49.1	1.3e-15	6	57	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++ ++v++ +lGg+ t+k I + m+ +g+t q+ks++qky+ Pav_sc0000661.1_g290.1.br 6 RLSWTQELHTKFVEVLSMLGGPaeaTPKQIREAMQvEGLTNDQVKSHLQKYR 57 799************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 124 aa Download sequence
MWKHGRLSWT QELHTKFVEV LSMLGGPAEA TPKQIREAMQ VEGLTNDQVK SHLQKYRLNS 60 VGVQPAASAK SSKRKVPFYF RDFWNPSASQ QQLESAGNGG GGSSSRGNAE PEMRKSKRSW 120 LGDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49560.1	5e-22	G2-like family protein