PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000678.1_g150.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 89aa    MW: 10267.9 Da    PI: 8.6364
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000678.1_g150.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-105885128
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIa 28
                               +g+WT+eEd +lv +++++G+g+W++++
  Pav_sc0000678.1_g150.1.br 58 KGPWTPEEDIILVYYIQEHGPGNWRAVP 85
                               79***********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MWMTLEFLRF AWNIRIPCSC KYDGAAARMA VDRITQRPKG FGFVTYKPPC CDKEGVKKGP  60
WTPEEDIILV YYIQEHGPGN WRAVPTNTV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.14e-26MYB family protein