PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000700.1_g1520.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 261aa MW: 29294.8 Da PI: 6.983

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000700.1_g1520.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	115.2	4e-36	56	155	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsf 80 lfqrlw++eDei lLqG++d+++ +g + ++d+ fy+++k++++++++k+qlveK+rrLKkK+++ +k++sgke+sf Pav_sc0000700.1_g1520.1.mk 56 LFQRLWTDEDEIELLQGFLDYTTMRGNkgshHGQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKIASGKEVSF 138 79******************9999865433345******************************************** PP DUF573 81 skehdqkifelskkiWg 97 +++hdq +fe+s+k+W Pav_sc0000700.1_g1520.1.mk 139 KSPHDQATFEISRKLWS 155 **************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
LPAREPPPLA LATTTSTATT VIANDAVLSS DPKRHAVLSP QPEEKKPAAL DDSRRLFQRL 60 WTDEDEIELL QGFLDYTTMR GNKGSHHGQN DTALFYDQIK SKLQLDFNKN QLVEKLRRLK 120 KKYRNVLNKI ASGKEVSFKS PHDQATFEIS RKLWSNIGRI GPDDNALDDE DPSPNPNNPN 180 FNNYEIKNEE AAARGFGGLS LNPIPLSFGG PSMNLNFGGG EGADEKWRKQ QILELEVYSK 240 RLELVQNQIK VALEELRSSR G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	9e-58	GeBP family protein