PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000700.1_g1720.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 705aa MW: 76783.9 Da PI: 5.936

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000700.1_g1720.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.6	3.4e-15	437	473	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 +k+CnCk+skClk+YC+Cfaag +C e C+C++C+Nk Pav_sc0000700.1_g1720.1.mk 437 CKRCNCKRSKCLKLYCDCFAAGLYCIEPCSCQECFNK 473 79**********************************8 PP
2	TCR	51.7	1.7e-16	521	560	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnC+ks ClkkYCeCf+ g+ Cs C+C +CkN+ Pav_sc0000700.1_g1720.1.mk 521 RHKRGCNCRKSGCLKKYCECFQGGAGCSILCRCIGCKNTF 560 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MDTPLKNQTT TPTTPLPSKY EDSPVFNYIS NLSPIEPVKS RGNDHTFNSL TFASLPSIFT 60 SPQNVSLGET RFSLRRHHSS EASNPESFQT PNPSDKLESV PVAVEQSYFG SKQSECFTPG 120 SSGTEVTNAI PTENLELAIE LSNTLKYSSG SPDRNVPCDA TDTVLETAAT PASLVQSVVH 180 HSEERHSSFE RETDLRRIRG MEREKEAAGV DWTRLISDAS DLLNFDSTTI EEGSDGEDPK 240 TVDPGAICFI SNILQDNHDG MEVMESGPID SSEQYELGKF SNQSEGIGDL KETDEAPAIL 300 SRNLLDKLNV DDKCPKCIHS SCKKLTKGNQ YVILVAVIQS HYSPIVKSPL LPGIGLHLNA 360 LATTSESNSS KVVNHETQAS ESQVTETPNS KISSTCLTPS EVSRDESCKS EVHIAETPPE 420 ACAPVGVESD HRESLACKRC NCKRSKCLKL YCDCFAAGLY CIEPCSCQEC FNKPIYENIV 480 VETRRLIESR NPLAFAPKVI GSINAAPQFG EETNSTPTSA RHKRGCNCRK SGCLKKYCEC 540 FQGGAGCSIL CRCIGCKNTF GRKDEAEESE IEEHKSRVWK KDATDVSLGR VKDQDLPMTL 600 SGICRPSGQL TASFSGKPKI FSLHSVLSSP QPEKHLQVIP EEGTLEALDN SCSQPSGVKS 660 TSPNSKRVSP PHGGSEFGSA AWRGGRKLVL RSIPPFPTLA SPRKH

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MDTPLKNQTT TPTTPLPSKY EDSPVFNYIS NLSPIEPVKS RGNDHTFNSL TFASLPSIFT  60
SPQNVSLGET RFSLRRHHSS EASNPESFQT PNPSDKLESV PVAVEQSYFG SKQSECFTPG  120
SSGTEVTNAI PTENLELAIE LSNTLKYSSG SPDRNVPCDA TDTVLETAAT PASLVQSVVH  180
HSEERHSSFE RETDLRRIRG MEREKEAAGV DWTRLISDAS DLLNFDSTTI EEGSDGEDPK  240
TVDPGAICFI SNILQDNHDG MEVMESGPID SSEQYELGKF SNQSEGIGDL KETDEAPAIL  300
SRNLLDKLNV DDKCPKCIHS SCKKLTKGNQ YVILVAVIQS HYSPIVKSPL LPGIGLHLNA  360
LATTSESNSS KVVNHETQAS ESQVTETPNS KISSTCLTPS EVSRDESCKS EVHIAETPPE  420
ACAPVGVESD HRESLACKRC NCKRSKCLKL YCDCFAAGLY CIEPCSCQEC FNKPIYENIV  480
VETRRLIESR NPLAFAPKVI GSINAAPQFG EETNSTPTSA RHKRGCNCRK SGCLKKYCEC  540
FQGGAGCSIL CRCIGCKNTF GRKDEAEESE IEEHKSRVWK KDATDVSLGR VKDQDLPMTL  600
SGICRPSGQL TASFSGKPKI FSLHSVLSSP QPEKHLQVIP EEGTLEALDN SCSQPSGVKS  660
TSPNSKRVSP PHGGSEFGSA AWRGGRKLVL RSIPPFPTLA SPRKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	6e-94	CPP family protein