PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000700.1_g590.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 343aa MW: 38661.2 Da PI: 5.4726

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000700.1_g590.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.1	6.4e-13	146	197	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P + + ++ + a+i A++++k+L+ Pav_sc0000700.1_g590.1.mk 146 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YVQRGDQASIIGGAINFVKELE 197 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MALDAVVFPQ DPFSCATNKD LYSYWSSFDD DHHNFGFHND QDHHDQLQHQ ASLDFLGYQT 60 DHNPPNYGTN YYSSAPLNSM VPHFNELQLS NPNPDVSDTT SPTDDQPEFH QLPSDQTITM 120 ADSMPSTRAK RRRAKSRKNK EEIENQRMTH IAVERNRRKQ MNEYLSVLRS LMPDSYVQRG 180 DQASIIGGAI NFVKELEQEV HFLGTQKPNN GVPFSQFFTF PQYSTRSSGD HDSGAAAMAE 240 LPLMECKLSN IAADIEVTMV ESHASLKVRA KRIPKQLLKI VSGLHGMHLT ILHLNVVTAD 300 DIVLYSLSLK VEDECTLASV DEIATAVHQM LATIQEEAML NLN

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MALDAVVFPQ DPFSCATNKD LYSYWSSFDD DHHNFGFHND QDHHDQLQHQ ASLDFLGYQT  60
DHNPPNYGTN YYSSAPLNSM VPHFNELQLS NPNPDVSDTT SPTDDQPEFH QLPSDQTITM  120
ADSMPSTRAK RRRAKSRKNK EEIENQRMTH IAVERNRRKQ MNEYLSVLRS LMPDSYVQRG  180
DQASIIGGAI NFVKELEQEV HFLGTQKPNN GVPFSQFFTF PQYSTRSSGD HDSGAAAMAE  240
LPLMECKLSN IAADIEVTMV ESHASLKVRA KRIPKQLLKI VSGLHGMHLT ILHLNVVTAD  300
DIVLYSLSLK VEDECTLASV DEIATAVHQM LATIQEEAML NLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	158	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	8e-70	bHLH family protein