PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000736.1_g010.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 369aa MW: 41162.5 Da PI: 8.7697

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000736.1_g010.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	37	91	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl Pav_sc0000736.1_g010.1.mk 37 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 91 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.5e-23	39	90	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ Pav_sc0000736.1_g010.1.mk 39 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 90 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MFQHPHQHHK KPSTMNSHDR PMCVQGDSGL VLTTDPKPRL RWTVELHERF VDAVTQLGGP 60 DKATPKTIMR VMGVKGLTLY HLKSHLQKFR LGKQPHKEFN DHSLKDHAAS PLDIHRNSAS 120 SSAMIGRSMN EMQMEVQRRL HEQLEVQKHL QLRIEAQGKY MQSILEKAYQ TLAGENNMAA 180 AAGSYKGNIG NQGVNPADMG ALKDFNSPLN FPSFQDLNIY GGDHLDLQQN LDRPPLDHSF 240 MPSNDNSICL GPKKRPSPYS GSGKSPLIWS DDLRLQDLGT AASCLGPQDD PFKTSDSIQI 300 APPSIERGSE MDSISDIYES KPMIQGEDKK FDSANKLERP SPRRTPLGSD RMNPMINTGV 360 RQGRNSPFG

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MFQHPHQHHK KPSTMNSHDR PMCVQGDSGL VLTTDPKPRL RWTVELHERF VDAVTQLGGP  60
DKATPKTIMR VMGVKGLTLY HLKSHLQKFR LGKQPHKEFN DHSLKDHAAS PLDIHRNSAS  120
SSAMIGRSMN EMQMEVQRRL HEQLEVQKHL QLRIEAQGKY MQSILEKAYQ TLAGENNMAA  180
AAGSYKGNIG NQGVNPADMG ALKDFNSPLN FPSFQDLNIY GGDHLDLQQN LDRPPLDHSF  240
MPSNDNSICL GPKKRPSPYS GSGKSPLIWS DDLRLQDLGT AASCLGPQDD PFKTSDSIQI  300
APPSIERGSE MDSISDIYES KPMIQGEDKK FDSANKLERP SPRRTPLGSD RMNPMINTGV  360
RQGRNSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-129	G2-like family protein