PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000740.1_g250.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 90aa    MW: 10192.2 Da    PI: 6.3352
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000740.1_g250.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY56.17.4e-1832692259
                               EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY 22 rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                                sYYrCt++gC+vkk+v+r ++d+++v++tYeg H h+
  Pav_sc0000740.1_g250.1.mk 32 VSYYRCTHQGCNVKKQVQRLSKDEEIVVTTYEGIHSHP 69
                               59***********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MEHNQILFLA LPKSSDSASP NLSSNPSNIS QVSYYRCTHQ GCNVKKQVQR LSKDEEIVVT  60
TYEGIHSHPT DETSAENFDQ ILRHLQTYNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.17e-24WRKY family protein