PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000747.1_g440.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 196aa    MW: 22566.2 Da    PI: 9.3465
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000747.1_g440.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.35.6e-09156195141
                       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkr 41 
                                kfY +Y+ e G+svrk++ +k+ + g +t+ t++Cskeg++
  Pav_sc0000747.1_g440.1.br 156 KFYVQYGGERGYSVRKQHWRKN-KLGIVTRVTYCCSKEGQT 195
                                6****************99998.7788************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MNHHAKSTTI ILEARAKSTF EAFSSMKPRS SGWWLRSLVG TQLKGIYGGH HNKERARDVE  60
VRSVGHRSGY EGGSNGRKER TETLLMARWM EIQEFPRLSN MLSSDVNVDL QGEDKSDPFT  120
HFSPTNDLDE LNKNNREKIE DDLLSREFSC HESAYKFYVQ YGGERGYSVR KQHWRKNKLG  180
IVTRVTYCCS KEGQTA